Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
yecSInner membrane amino-acid ABC transporter permease protein yecS. (220 aa)    
Predicted Functional Partners:
fliY_2
Bacterial extracellular solute-binding s, 3 family protein.
  0.999
tcyC
ABC transporter family protein.
  
  0.991
artJ
ABC transporter arginine-binding protein 1; Belongs to the bacterial solute-binding protein 3 family.
   0.979
artI3_2
Bacterial extracellular solute-binding s, 3 family protein.
   0.978
glnH
Bacterial extracellular solute-binding s, 3 family protein.
   0.978
artI3_1
3A0103s03R: lysine-arginine-ornithine-binding periplasmic family protein; Belongs to the bacterial solute-binding protein 3 family.
   0.977
artP-2
Arginine transport ATP-binding protein ArtP.
   0.924
glnQ_2
ABC transporter family protein.
   0.915
gltL
ABC transporter family protein.
   0.914
glnQ_1
Hypothetical protein.
   0.906
Your Current Organism:
Yersinia rohdei
NCBI taxonomy Id: 29485
Other names: ATCC 43380, CCUG 38833, CDC 3022-85, CIP 103163, JCM 7376, LMG 8454, LMG:8454, Y. rohdei, strain H271-36/78
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