Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CH64_334 | aRO82 | CH64_334 | CH64_337 | Hypothetical protein. | Aminotransferase class I and II family protein. | 0.503 |
CH64_334 | cydA | CH64_334 | CH64_3791 | Hypothetical protein. | Cytochrome d ubiquinol oxidase subunit 1. | 0.687 |
CH64_334 | cydA_1 | CH64_334 | CH64_336 | Hypothetical protein. | Bacterial Cytochrome Ubiquinol Oxidase family protein. | 0.926 |
CH64_334 | cydB | CH64_334 | CH64_335 | Hypothetical protein. | cydB: cytochrome d ubiquinol oxidase, subunit II. | 0.929 |
CH64_334 | cydB-2 | CH64_334 | CH64_3792 | Hypothetical protein. | cydB: cytochrome d ubiquinol oxidase, subunit II. | 0.699 |
CH64_334 | narX | CH64_334 | CH64_333 | Hypothetical protein. | Nitrate/nitrite sensor protein narX. | 0.598 |
aRO82 | CH64_334 | CH64_337 | CH64_334 | Aminotransferase class I and II family protein. | Hypothetical protein. | 0.503 |
aRO82 | cydA_1 | CH64_337 | CH64_336 | Aminotransferase class I and II family protein. | Bacterial Cytochrome Ubiquinol Oxidase family protein. | 0.503 |
aRO82 | cydB | CH64_337 | CH64_335 | Aminotransferase class I and II family protein. | cydB: cytochrome d ubiquinol oxidase, subunit II. | 0.503 |
aRO82 | narX | CH64_337 | CH64_333 | Aminotransferase class I and II family protein. | Nitrate/nitrite sensor protein narX. | 0.402 |
cydA | CH64_334 | CH64_3791 | CH64_334 | Cytochrome d ubiquinol oxidase subunit 1. | Hypothetical protein. | 0.687 |
cydA | cydA_1 | CH64_3791 | CH64_336 | Cytochrome d ubiquinol oxidase subunit 1. | Bacterial Cytochrome Ubiquinol Oxidase family protein. | 0.917 |
cydA | cydB | CH64_3791 | CH64_335 | Cytochrome d ubiquinol oxidase subunit 1. | cydB: cytochrome d ubiquinol oxidase, subunit II. | 0.984 |
cydA | cydB-2 | CH64_3791 | CH64_3792 | Cytochrome d ubiquinol oxidase subunit 1. | cydB: cytochrome d ubiquinol oxidase, subunit II. | 0.999 |
cydA_1 | CH64_334 | CH64_336 | CH64_334 | Bacterial Cytochrome Ubiquinol Oxidase family protein. | Hypothetical protein. | 0.926 |
cydA_1 | aRO82 | CH64_336 | CH64_337 | Bacterial Cytochrome Ubiquinol Oxidase family protein. | Aminotransferase class I and II family protein. | 0.503 |
cydA_1 | cydA | CH64_336 | CH64_3791 | Bacterial Cytochrome Ubiquinol Oxidase family protein. | Cytochrome d ubiquinol oxidase subunit 1. | 0.917 |
cydA_1 | cydB | CH64_336 | CH64_335 | Bacterial Cytochrome Ubiquinol Oxidase family protein. | cydB: cytochrome d ubiquinol oxidase, subunit II. | 0.999 |
cydA_1 | cydB-2 | CH64_336 | CH64_3792 | Bacterial Cytochrome Ubiquinol Oxidase family protein. | cydB: cytochrome d ubiquinol oxidase, subunit II. | 0.986 |
cydA_1 | narX | CH64_336 | CH64_333 | Bacterial Cytochrome Ubiquinol Oxidase family protein. | Nitrate/nitrite sensor protein narX. | 0.624 |
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