Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CH64_3875 | bhsA_3 | CH64_3875 | CH64_3874 | Flavin reductase like domain protein. | Hypothetical protein. | 0.500 |
CH64_3875 | limB_1 | CH64_3875 | CH64_2159 | Flavin reductase like domain protein. | Oxido_grp_1: luciferase oxidoreductase, group 1 family protein. | 0.539 |
CH64_3875 | limB_2 | CH64_3875 | CH64_3072 | Flavin reductase like domain protein. | Oxido_grp_1: luciferase oxidoreductase, group 1 family protein. | 0.539 |
CH64_3875 | purB | CH64_3875 | CH64_903 | Flavin reductase like domain protein. | purB: adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.403 |
CH64_3875 | rlmF | CH64_3875 | CH64_3876 | Flavin reductase like domain protein. | Hypothetical protein; Specifically methylates the adenine in position 1618 of 23S rRNA. | 0.599 |
CH64_3875 | ydjA | CH64_3875 | CH64_456 | Flavin reductase like domain protein. | Nitroreductase family protein. | 0.423 |
bhsA_3 | CH64_3875 | CH64_3874 | CH64_3875 | Hypothetical protein. | Flavin reductase like domain protein. | 0.500 |
limB_1 | CH64_3875 | CH64_2159 | CH64_3875 | Oxido_grp_1: luciferase oxidoreductase, group 1 family protein. | Flavin reductase like domain protein. | 0.539 |
limB_2 | CH64_3875 | CH64_3072 | CH64_3875 | Oxido_grp_1: luciferase oxidoreductase, group 1 family protein. | Flavin reductase like domain protein. | 0.539 |
purB | CH64_3875 | CH64_903 | CH64_3875 | purB: adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Flavin reductase like domain protein. | 0.403 |
rlmF | CH64_3875 | CH64_3876 | CH64_3875 | Hypothetical protein; Specifically methylates the adenine in position 1618 of 23S rRNA. | Flavin reductase like domain protein. | 0.599 |
ydjA | CH64_3875 | CH64_456 | CH64_3875 | Nitroreductase family protein. | Flavin reductase like domain protein. | 0.423 |