Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CH64_2089 | CH64_3433 | CH64_2089 | CH64_3433 | Glycosyltransferase 9 family protein. | Hypothetical protein. | 0.507 |
CH64_2089 | pepPQ | CH64_2089 | CH64_3889 | Glycosyltransferase 9 family protein. | pepP/PepQ-like peptidase, M24 family. | 0.417 |
CH64_3433 | CH64_2089 | CH64_3433 | CH64_2089 | Hypothetical protein. | Glycosyltransferase 9 family protein. | 0.507 |
CH64_3433 | pepPQ | CH64_3433 | CH64_3889 | Hypothetical protein. | pepP/PepQ-like peptidase, M24 family. | 0.573 |
CH64_3888 | pepPQ | CH64_3888 | CH64_3889 | CDF: cation diffusion facilitator transporter family protein. | pepP/PepQ-like peptidase, M24 family. | 0.603 |
ccmA-9 | pepPQ | CH64_3890 | CH64_3889 | ccmA: heme ABC exporter, ATP-binding protein CcmA. | pepP/PepQ-like peptidase, M24 family. | 0.436 |
echA8 | pepPQ | CH64_2642 | CH64_3889 | enoyl-CoA hydratase/isomerase family protein. | pepP/PepQ-like peptidase, M24 family. | 0.452 |
pepPQ | CH64_2089 | CH64_3889 | CH64_2089 | pepP/PepQ-like peptidase, M24 family. | Glycosyltransferase 9 family protein. | 0.417 |
pepPQ | CH64_3433 | CH64_3889 | CH64_3433 | pepP/PepQ-like peptidase, M24 family. | Hypothetical protein. | 0.573 |
pepPQ | CH64_3888 | CH64_3889 | CH64_3888 | pepP/PepQ-like peptidase, M24 family. | CDF: cation diffusion facilitator transporter family protein. | 0.603 |
pepPQ | ccmA-9 | CH64_3889 | CH64_3890 | pepP/PepQ-like peptidase, M24 family. | ccmA: heme ABC exporter, ATP-binding protein CcmA. | 0.436 |
pepPQ | echA8 | CH64_3889 | CH64_2642 | pepP/PepQ-like peptidase, M24 family. | enoyl-CoA hydratase/isomerase family protein. | 0.452 |