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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yeaDAldose 1-epimerase family protein; Belongs to the glucose-6-phosphate 1-epimerase family. (291 aa)    
Predicted Functional Partners:
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
   
 
 0.920
pgm
Pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific.
     
 0.920
glk
Glk: glucokinase; Belongs to the bacterial glucokinase family.
    
  0.913
crr
Glucose-specific phosphotransferase enzyme IIA component.
  
  
  0.912
bglA
Glycosyl hydrolase 1 family protein; Belongs to the glycosyl hydrolase 1 family.
     
 0.900
gmuD_2
Glycosyl hydrolase 1 family protein; Belongs to the glycosyl hydrolase 1 family.
     
 0.900
ascB
Glycosyl hydrolase 1 family protein; Belongs to the glycosyl hydrolase 1 family.
     
 0.900
gmuD_1
Glycosyl hydrolase 1 family protein; Belongs to the glycosyl hydrolase 1 family.
     
 0.900
chbF
Hypothetical protein; Family 4 glycosyl hydrolase C-terminal domain protein.
     
  0.900
malX
pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component domain protein.
     
  0.900
Your Current Organism:
Yersinia rohdei
NCBI taxonomy Id: 29485
Other names: ATCC 43380, CCUG 38833, CDC 3022-85, CIP 103163, JCM 7376, LMG 8454, LMG:8454, Y. rohdei, strain H271-36/78
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