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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
algCPhosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein. (458 aa)    
Predicted Functional Partners:
manC1
GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 0.996
manX
PTS system mannose-specific EIIAB component.
    
 0.931
manA
manA: mannose-6-phosphate isomerase, class I; Belongs to the mannose-6-phosphate isomerase type 1 family.
  
 
 0.929
manZ
EIID-AGA: PTS system, mannose/fructose/sorbose, IID component family protein.
    
  0.903
manY
EII-Sor: PTS system, mannose/fructose/sorbose, IIC component family protein.
     
  0.900
kpsM
ABC-2 type transporter family protein.
       0.786
tagH
ABC transporter family protein.
  
    0.760
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
  
 0.704
wcaJ
wcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase.
  
  
 0.693
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
  
 0.687
Your Current Organism:
Yersinia rohdei
NCBI taxonomy Id: 29485
Other names: ATCC 43380, CCUG 38833, CDC 3022-85, CIP 103163, JCM 7376, LMG 8454, LMG:8454, Y. rohdei, strain H271-36/78
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