fnr protein (Yersinia rohdei) - STRING interaction network

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Predicted Interactions

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Score

fnr

Fumarate and nitrate reduction regulatory protein. (250 aa)

Predicted Functional Partners:

rpoB

0.743

CH64_2780

0.732

rpoC

0.729

uspE

0.710

rpoA

0.689

rpoZ

0.682

CH64_1397

0.659

CH64_1474

0.659

pgaA

0.656

hemN

0.640

Your Current Organism:

Yersinia rohdei

NCBI taxonomy Id: 29485
Other names: ATCC 43380, CCUG 38833, CDC 3022-85, CIP 103163, JCM 7376, LMG 8454, LMG:8454, Y. rohdei, strain H271-36/78

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CH64_1397	fnr	CH64_1397	CH64_620	Tetratricopeptide repeat family protein.	Fumarate and nitrate reduction regulatory protein.	0.659
CH64_1397	rpoA	CH64_1397	CH64_2319	Tetratricopeptide repeat family protein.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.744
CH64_1397	rpoB	CH64_1397	CH64_2884	Tetratricopeptide repeat family protein.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.748
CH64_1397	rpoZ	CH64_1397	CH64_2638	Tetratricopeptide repeat family protein.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.717
CH64_1474	fnr	CH64_1474	CH64_620	sseB C-terminal domain protein.	Fumarate and nitrate reduction regulatory protein.	0.659
CH64_1474	rpoA	CH64_1474	CH64_2319	sseB C-terminal domain protein.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.744
CH64_1474	rpoB	CH64_1474	CH64_2884	sseB C-terminal domain protein.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.748
CH64_1474	rpoZ	CH64_1474	CH64_2638	sseB C-terminal domain protein.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.717
CH64_2780	fnr	CH64_2780	CH64_620	Pentapeptide repeats family protein.	Fumarate and nitrate reduction regulatory protein.	0.732
CH64_2780	rpoA	CH64_2780	CH64_2319	Pentapeptide repeats family protein.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.746
CH64_2780	rpoB	CH64_2780	CH64_2884	Pentapeptide repeats family protein.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.794
CH64_2780	rpoZ	CH64_2780	CH64_2638	Pentapeptide repeats family protein.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.735
fnr	CH64_1397	CH64_620	CH64_1397	Fumarate and nitrate reduction regulatory protein.	Tetratricopeptide repeat family protein.	0.659
fnr	CH64_1474	CH64_620	CH64_1474	Fumarate and nitrate reduction regulatory protein.	sseB C-terminal domain protein.	0.659
fnr	CH64_2780	CH64_620	CH64_2780	Fumarate and nitrate reduction regulatory protein.	Pentapeptide repeats family protein.	0.732
fnr	hemN	CH64_620	CH64_2620	Fumarate and nitrate reduction regulatory protein.	hemN: oxygen-independent coproporphyrinogen III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.	0.640
fnr	pgaA	CH64_620	CH64_323	Fumarate and nitrate reduction regulatory protein.	PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA.	0.656
fnr	rpoA	CH64_620	CH64_2319	Fumarate and nitrate reduction regulatory protein.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.689
fnr	rpoB	CH64_620	CH64_2884	Fumarate and nitrate reduction regulatory protein.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.743
fnr	rpoC	CH64_620	CH64_2885	Fumarate and nitrate reduction regulatory protein.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.729