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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sacASucrose-6-phosphate hydrolase family protein; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family. (452 aa)    
Predicted Functional Partners:
scrA
PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component.
 
 
 0.979
scrK
pfkB carbohydrate kinase family protein; Belongs to the carbohydrate kinase PfkB family.
 
 0.965
rafA
Alpha-galactosidase.
 
  
 0.950
yicI
Glycosyl hydrolases 31 family protein; Belongs to the glycosyl hydrolase 31 family.
   
 
 0.918
ascB
Glycosyl hydrolase 1 family protein; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.915
scrB
Sucrose-6-phosphate hydrolase family protein; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
  
 
0.915
mak
Glucokinase family protein.
  
 
 0.911
malZ
Hypothetical protein; Alpha amylase, N-terminal ig-like domain protein.
  
 
 0.911
chbF
Hypothetical protein; Family 4 glycosyl hydrolase C-terminal domain protein.
     
 0.908
bglA
Glycosyl hydrolase 1 family protein; Belongs to the glycosyl hydrolase 1 family.
   
 
 0.903
Your Current Organism:
Yersinia rohdei
NCBI taxonomy Id: 29485
Other names: ATCC 43380, CCUG 38833, CDC 3022-85, CIP 103163, JCM 7376, LMG 8454, LMG:8454, Y. rohdei, strain H271-36/78
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