Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cstA | yabI_2 | UGYR_08975 | UGYR_08970 | Carbon starvation protein CstA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome O ubiquinol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.494 |
| rmuC | ubiB | UGYR_08965 | UGYR_08950 | DNA recombination protein RmuC; YigN; nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence; transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ubiquinone biosynthesis protein UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. | 0.544 |
| rmuC | yabI_2 | UGYR_08965 | UGYR_08970 | DNA recombination protein RmuC; YigN; nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence; transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome O ubiquinol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.455 |
| ubiB | rmuC | UGYR_08950 | UGYR_08965 | Ubiquinone biosynthesis protein UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. | DNA recombination protein RmuC; YigN; nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence; transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.544 |
| ubiB | yabI_2 | UGYR_08950 | UGYR_08970 | Ubiquinone biosynthesis protein UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. | Cytochrome O ubiquinol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.400 |
| yabI_2 | cstA | UGYR_08970 | UGYR_08975 | Cytochrome O ubiquinol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carbon starvation protein CstA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.494 |
| yabI_2 | rmuC | UGYR_08970 | UGYR_08965 | Cytochrome O ubiquinol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA recombination protein RmuC; YigN; nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence; transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.455 |
| yabI_2 | ubiB | UGYR_08970 | UGYR_08950 | Cytochrome O ubiquinol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ubiquinone biosynthesis protein UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. | 0.400 |