STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltIAmino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)    
Predicted Functional Partners:
artP
Arginine transporter ATP-binding subunit; With ArtMQJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
gltJ1
Amino acid ABC transporter permease; With GltIKL is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
gltK
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.997
yecS_1
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.792
artM5
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.783
barA_1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.709
glnQ
Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.673
yecS_2
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.613
glnP
Similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.604
arcB_2
Aerobic respiration control sensor protein ArcB; Sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon; hybrid sensory histidine kinase in two-component regulatory system with ArcA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.571
Your Current Organism:
Yersinia ruckeri
NCBI taxonomy Id: 29486
Other names: ATCC 29473, CCM 6093, CCUG 14190, CDC 2396-61, CIP 82.80, DSM 18506, JCM 15110, JCM 2429, NCIB 2194, NCIMB 2194, NCTC 12986, Y. ruckeri
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