STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGM29700.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)    
Predicted Functional Partners:
KGM29702.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.963
KGM29698.1
Phage baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.954
KGM29699.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.946
KGM29703.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.940
KGM29696.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.936
KGM29704.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.895
KGM29606.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.890
KGM28965.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.890
KGM28984.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.890
KGM29021.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.890
Your Current Organism:
Photorhabdus luminescens
NCBI taxonomy Id: 29488
Other names: ATCC 29999, CIP 106429, DSM 3368, P. luminescens, Xenorhabdus luminescens, strain Hb
Server load: high (86%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.