STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGM29766.1Peptide/polyketide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (3908 aa)    
Predicted Functional Partners:
KGM28434.1
Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.984
KGM29397.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.980
KGM29156.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.980
KGM26347.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.977
KGM27007.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.973
KGM27005.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.970
KGM28224.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.966
KGM29764.1
Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.953
KGM29765.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.932
KGM29763.1
AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
0.926
Your Current Organism:
Photorhabdus luminescens
NCBI taxonomy Id: 29488
Other names: ATCC 29999, CIP 106429, DSM 3368, P. luminescens, Xenorhabdus luminescens, strain Hb
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.