STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGM29773.1Polyurethanase; Derived by automated computational analysis using gene prediction method: Protein Homology. (617 aa)    
Predicted Functional Partners:
inh
Proteinase inhibitor; Inhibitor of the alkaline protease.
  
 
 0.846
guaB
Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.669
KGM28762.1
Killer protein of pyocin s3; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.647
KGM29615.1
HicA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.646
KGM26603.1
Phosphoglycerol transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.645
KGM28085.1
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.643
KGM29483.1
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.632
KGM27070.1
Serine 3-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.600
KGM28662.1
Fimbrial assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.598
KGM28831.1
Fimbrial assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.598
Your Current Organism:
Photorhabdus luminescens
NCBI taxonomy Id: 29488
Other names: ATCC 29999, CIP 106429, DSM 3368, P. luminescens, Xenorhabdus luminescens, strain Hb
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.