STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGM28973.1Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa)    
Predicted Functional Partners:
KGM28968.1
Phage baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.956
KGM28972.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.941
KGM28970.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.935
KGM28969.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.919
KGM28966.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.913
KGM28976.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.897
KGM29603.1
Phage baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.880
KGM29698.1
Phage baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.880
KGM28987.1
Phage baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.880
KGM29006.1
Phage baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.880
Your Current Organism:
Photorhabdus luminescens
NCBI taxonomy Id: 29488
Other names: ATCC 29999, CIP 106429, DSM 3368, P. luminescens, Xenorhabdus luminescens, strain Hb
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.