Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KGM29034.1Prepilin; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. (265 aa)    
Predicted Functional Partners:
KGM25954.1
Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase A24 family.
  
  
 
0.919
KGM27818.1
Component in type IV pilin biogenesis,transmembrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.903
KGM29041.1
Type ii secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.882
KGM27817.1
Transporter HofB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.851
KGM25959.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.843
KGM28929.1
Competence protein ComEC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.809
KGM29035.1
Secondary type iv prepilin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.713
KGM26919.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.712
KGM28645.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.662
nuoC
NADH:ubiquinone oxidoreductase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
    
  0.657
Your Current Organism:
Photorhabdus luminescens
NCBI taxonomy Id: 29488
Other names: ATCC 29999, CIP 106429, DSM 3368, P. luminescens, Xenorhabdus luminescens, strain Hb
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.