STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGM27068.1Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)    
Predicted Functional Partners:
KGM27067.1
EvpB family type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.977
KGM27066.1
Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.959
KGM27063.1
Hcp family T6SS protein CtsH1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.938
KGM28283.1
EvpB family type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.934
KGM29781.1
EvpB family type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.933
KGM26522.1
Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.933
KGM27065.1
Type VI secretion protein ImpK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.925
KGM29782.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.904
KGM29789.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.893
KGM29791.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.892
Your Current Organism:
Photorhabdus luminescens
NCBI taxonomy Id: 29488
Other names: ATCC 29999, CIP 106429, DSM 3368, P. luminescens, Xenorhabdus luminescens, strain Hb
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