STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGM26669.1Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)    
Predicted Functional Partners:
KGM26670.1
Peptidase C39; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.979
KGM26668.1
Peptidase C39; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.977
KGM27300.1
Peptidase C39; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.904
KGM27302.1
Peptidase C39; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.904
KGM29394.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.894
macB
Macrolide transporter; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 0.894
KGM27139.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.765
KGM26672.1
Lysine acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.734
KGM28398.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.702
KGM29477.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.690
Your Current Organism:
Photorhabdus luminescens
NCBI taxonomy Id: 29488
Other names: ATCC 29999, CIP 106429, DSM 3368, P. luminescens, Xenorhabdus luminescens, strain Hb
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.