Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KMK90177.1 | KMK90329.1 | VL01_20995 | VL01_20330 | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.996 |
| KMK90177.1 | KMK94245.1 | VL01_20995 | VL01_10775 | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.996 |
| KMK90177.1 | KMK97491.1 | VL01_20995 | VL01_05015 | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit gamma/tau; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.995 |
| KMK90177.1 | KMK98739.1 | VL01_20995 | VL01_00360 | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.991 |
| KMK90177.1 | dnaE | VL01_20995 | VL01_06850 | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit alpha; Catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.996 |
| KMK90177.1 | dnaQ | VL01_20995 | VL01_03125 | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.955 |
| KMK90177.1 | polA | VL01_20995 | VL01_17775 | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.460 |
| KMK90329.1 | KMK90177.1 | VL01_20330 | VL01_20995 | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.996 |
| KMK90329.1 | KMK94245.1 | VL01_20330 | VL01_10775 | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| KMK90329.1 | KMK97491.1 | VL01_20330 | VL01_05015 | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit gamma/tau; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.997 |
| KMK90329.1 | KMK97674.1 | VL01_20330 | VL01_05515 | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.965 |
| KMK90329.1 | KMK98739.1 | VL01_20330 | VL01_00360 | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.998 |
| KMK90329.1 | dinB | VL01_20330 | VL01_07070 | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.877 |
| KMK90329.1 | dnaE | VL01_20330 | VL01_06850 | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit alpha; Catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.997 |
| KMK90329.1 | dnaQ | VL01_20330 | VL01_03125 | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.945 |
| KMK90329.1 | polA | VL01_20330 | VL01_17775 | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.946 |
| KMK94245.1 | KMK90177.1 | VL01_10775 | VL01_20995 | DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.996 |
| KMK94245.1 | KMK90329.1 | VL01_10775 | VL01_20330 | DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| KMK94245.1 | KMK97491.1 | VL01_10775 | VL01_05015 | DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit gamma/tau; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.997 |
| KMK94245.1 | KMK98739.1 | VL01_10775 | VL01_00360 | DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.998 |
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