Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KMK90693.1Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)    
Predicted Functional Partners:
KMK92458.1
Hemagglutinin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.768
KMK93190.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.727
KMK98450.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.682
KMK94532.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.682
KMK93486.1
Structural toxin protein RtxA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.682
KMK92845.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.682
KMK90650.1
MSHA biogenesis protein MshQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.682
KMK97024.1
Collagenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.680
KMK90680.1
RTX toxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.641
dinB
DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
   
 
 0.624
Your Current Organism:
Aeromonas enteropelogenes
NCBI taxonomy Id: 29489
Other names: A. enteropelogenes, ATCC 49657 [[Aeromonas trota]], ATCC 49803, Aeromonas sp. LK14, Aeromonas trota, Aeromonas tructi, CCUG 29544 [[Aeromonas trota]], CCUG 30367 [[Aeromonas trota]], CECT 4255 [[Aeromonas trota]], CECT 4487, CIP 103677 [[Aeromonas trota]], CIP 104434, DSM 6394, DSM 7312 [[Aeromonas trota]], JCM 8315 [[Aeromonas trota]], JCM 8355, LMG 12223 [[Aeromonas trota]], LMG 12646, LMG:12223 [[Aeromonas trota]], LMG:12646, strain AH2 [[Aeromonas trota]], strain J11
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