Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KMK90292.1 | KMK90294.1 | VL01_20145 | VL01_20155 | Free methionine-(R)-sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | 0.627 |
| KMK90292.1 | pepN | VL01_20145 | VL01_20160 | Free methionine-(R)-sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.424 |
| KMK90292.1 | proQ | VL01_20145 | VL01_20150 | Free methionine-(R)-sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Osmoprotectant transporter ProQ; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | 0.738 |
| KMK90294.1 | KMK90292.1 | VL01_20155 | VL01_20145 | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | Free methionine-(R)-sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.627 |
| KMK90294.1 | KMK91211.1 | VL01_20155 | VL01_17560 | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.607 |
| KMK90294.1 | KMK94172.1 | VL01_20155 | VL01_10400 | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | Pyruvate-flavodoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.726 |
| KMK90294.1 | KMK94532.1 | VL01_20155 | VL01_09810 | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.587 |
| KMK90294.1 | KMK97024.1 | VL01_20155 | VL01_06010 | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | Collagenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.587 |
| KMK90294.1 | KMK98146.1 | VL01_20155 | VL01_04085 | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | Lipoprotein NlpI; May be involved in cell division. | 0.923 |
| KMK90294.1 | KMK98450.1 | VL01_20155 | VL01_01060 | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.587 |
| KMK90294.1 | pepN | VL01_20155 | VL01_20160 | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.730 |
| KMK90294.1 | pheT | VL01_20155 | VL01_20000 | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | phenylalanine--tRNA ligase; Catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.624 |
| KMK90294.1 | proQ | VL01_20155 | VL01_20150 | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | Osmoprotectant transporter ProQ; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | 0.871 |
| KMK91211.1 | KMK90294.1 | VL01_17560 | VL01_20155 | Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | 0.607 |
| KMK94172.1 | KMK90294.1 | VL01_10400 | VL01_20155 | Pyruvate-flavodoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | 0.726 |
| KMK94532.1 | KMK90294.1 | VL01_09810 | VL01_20155 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | 0.587 |
| KMK97024.1 | KMK90294.1 | VL01_06010 | VL01_20155 | Collagenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | 0.587 |
| KMK98146.1 | KMK90294.1 | VL01_04085 | VL01_20155 | Lipoprotein NlpI; May be involved in cell division. | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | 0.923 |
| KMK98146.1 | proQ | VL01_04085 | VL01_20150 | Lipoprotein NlpI; May be involved in cell division. | Osmoprotectant transporter ProQ; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | 0.778 |
| KMK98450.1 | KMK90294.1 | VL01_01060 | VL01_20155 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. | 0.587 |
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