KMK90173.1 protein (Aeromonas enteropelogenes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

KMK90173.1

RDD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (173 aa)

Predicted Functional Partners:

KMK92049.1

0.737

KMK98400.1

0.704

KMK90137.1

0.669

KMK91188.1

0.641

KMK92047.1

0.640

KMK98236.1

0.585

KMK98293.1

0.577

KMK92048.1

0.559

KMK98258.1

0.558

KMK97956.1

0.536

Your Current Organism:

Aeromonas enteropelogenes

NCBI taxonomy Id: 29489
Other names: A. enteropelogenes, ATCC 49657 [[Aeromonas trota]], ATCC 49803, Aeromonas sp. LK14, Aeromonas trota, Aeromonas tructi, CCUG 29544 [[Aeromonas trota]], CCUG 30367 [[Aeromonas trota]], CECT 4255 [[Aeromonas trota]], CECT 4487, CIP 103677 [[Aeromonas trota]], CIP 104434, DSM 6394, DSM 7312 [[Aeromonas trota]], JCM 8315 [[Aeromonas trota]], JCM 8355, LMG 12223 [[Aeromonas trota]], LMG 12646, LMG:12223 [[Aeromonas trota]], LMG:12646, strain AH2 [[Aeromonas trota]], strain J11

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KMK90137.1	KMK90173.1	VL01_20785	VL01_20975	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RDD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.669
KMK90137.1	KMK92049.1	VL01_20785	VL01_15160	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
KMK90137.1	KMK98258.1	VL01_20785	VL01_02450	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.684
KMK90173.1	KMK90137.1	VL01_20975	VL01_20785	RDD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.669
KMK90173.1	KMK91188.1	VL01_20975	VL01_17440	RDD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.641
KMK90173.1	KMK92047.1	VL01_20975	VL01_15150	RDD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ubiquinol-cytochrome C reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.640
KMK90173.1	KMK92048.1	VL01_20975	VL01_15155	RDD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.559
KMK90173.1	KMK92049.1	VL01_20975	VL01_15160	RDD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.737
KMK90173.1	KMK97956.1	VL01_20975	VL01_03980	RDD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0149 family.	0.536
KMK90173.1	KMK98236.1	VL01_20975	VL01_02340	RDD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.	0.585
KMK90173.1	KMK98258.1	VL01_20975	VL01_02450	RDD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.558
KMK90173.1	KMK98293.1	VL01_20975	VL01_02635	RDD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.577
KMK90173.1	KMK98400.1	VL01_20975	VL01_00800	RDD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ribosome-associated heat shock protein Hsp15; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HSP15 family.	0.704
KMK91188.1	KMK90173.1	VL01_17440	VL01_20975	Derived by automated computational analysis using gene prediction method: Protein Homology.	RDD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.641
KMK91188.1	KMK92047.1	VL01_17440	VL01_15150	Derived by automated computational analysis using gene prediction method: Protein Homology.	Ubiquinol-cytochrome C reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.978
KMK91188.1	KMK92048.1	VL01_17440	VL01_15155	Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.953
KMK91188.1	KMK92049.1	VL01_17440	VL01_15160	Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
KMK92047.1	KMK90173.1	VL01_15150	VL01_20975	Ubiquinol-cytochrome C reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	RDD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.640
KMK92047.1	KMK91188.1	VL01_15150	VL01_17440	Ubiquinol-cytochrome C reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.978
KMK92047.1	KMK92048.1	VL01_15150	VL01_15155	Ubiquinol-cytochrome C reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.999

page 1 of 2

Server load: low (22%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About