STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4SPI8_AERS4Unannotated protein. (281 aa)    
Predicted Functional Partners:
yihI
Unannotated protein; A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis. Belongs to the YihI family.
  
     0.615
lapA
Unannotated protein; Involved in the assembly of lipopolysaccharide (LPS). Belongs to the LapA family.
  
     0.605
GCA_000820065_02898
Unannotated protein.
  
     0.575
ompII
Unannotated protein.
  
     0.542
seqA
Unannotated protein; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated.
  
     0.523
A4SSG3_AERS4
Unannotated protein.
  
     0.513
Y3305_AERS4
Unannotated protein; Belongs to the UPF0270 family.
  
     0.493
A4SJF3_AERS4
Unannotated protein; Belongs to the UPF0255 family.
 
     0.481
zapC
Unannotated protein; Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ.
  
     0.478
Y2693_AERS4
Unannotated protein; Belongs to the UPF0352 family.
  
     0.456
Your Current Organism:
Aeromonas salmonicida
NCBI taxonomy Id: 29491
Other names: A. salmonicida subsp. salmonicida, Aeromonas salmonicida salmonicida, Aeromonas salmonicida subsp. salmonicida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.