STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4SNU9_AERS4Unannotated protein; Belongs to the glycosyl hydrolase 3 family. (793 aa)    
Predicted Functional Partners:
GCA_000820065_00472
Unannotated protein.
    
 0.946
malZ
Unannotated protein; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.939
A4SIC8_AERS4
Unannotated protein; Belongs to the glycosyl hydrolase 1 family.
 
  
 0.868
A4SQN3_AERS4
Unannotated protein.
    
 0.863
scrB
Unannotated protein; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.843
A4SNF4_AERS4
Unannotated protein.
 
  
 0.749
ampC
Unannotated protein.
  
 
 0.738
infB
Unannotated protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
  
  
 0.721
GCA_000820065_01286
Unannotated protein.
 
  
 0.651
cyoD
Unannotated protein.
    
 0.646
Your Current Organism:
Aeromonas salmonicida
NCBI taxonomy Id: 29491
Other names: A. salmonicida subsp. salmonicida, Aeromonas salmonicida salmonicida, Aeromonas salmonicida subsp. salmonicida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.