STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rimKUnannotated protein. (298 aa)    
Predicted Functional Partners:
A4SLU1_AERS4
Unannotated protein.
 
  
 0.800
gltB
Unannotated protein.
    
 0.790
A4SPN9_AERS4
Unannotated protein.
 
     0.788
A4SJY9_AERS4
Unannotated protein.
 
     0.755
gshA
Unannotated protein; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
  
 
 0.475
A4SQP1_AERS4
Unannotated protein.
    
 0.471
sucA
Unannotated protein.
   
 0.460
A4SLR7_AERS4
Unannotated protein; Belongs to the flavin oxidoreductase frp family.
  
  
 0.445
argA
Unannotated protein; Belongs to the acetyltransferase family. ArgA subfamily.
    
 0.444
metH
Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.439
Your Current Organism:
Aeromonas salmonicida
NCBI taxonomy Id: 29491
Other names: A. salmonicida subsp. salmonicida, Aeromonas salmonicida salmonicida, Aeromonas salmonicida subsp. salmonicida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.