Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A4SHQ7_AERS4 | pntA | GCA_000820065_01313 | GCA_000820065_01311 | Unannotated protein. | Unannotated protein; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the AlaDH/PNT family. | 0.516 |
A4SHQ7_AERS4 | pntB | GCA_000820065_01313 | GCA_000820065_01312 | Unannotated protein. | Unannotated protein; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.529 |
cobB | mazG | GCA_000820065_03898 | GCA_000820065_01045 | Unannotated protein; Belongs to the sirtuin family. Class III subfamily. | Unannotated protein. | 0.933 |
cobB | nadD | GCA_000820065_03898 | GCA_000820065_02573 | Unannotated protein; Belongs to the sirtuin family. Class III subfamily. | Unannotated protein; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.957 |
cobB | nadE | GCA_000820065_03898 | GCA_000820065_01799 | Unannotated protein; Belongs to the sirtuin family. Class III subfamily. | Unannotated protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.961 |
cobB | nadK | GCA_000820065_03898 | GCA_000820065_02233 | Unannotated protein; Belongs to the sirtuin family. Class III subfamily. | Unannotated protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.951 |
cobB | pheT | GCA_000820065_03898 | GCA_000820065_03904 | Unannotated protein; Belongs to the sirtuin family. Class III subfamily. | Unannotated protein; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.599 |
cobB | pntA | GCA_000820065_03898 | GCA_000820065_01311 | Unannotated protein; Belongs to the sirtuin family. Class III subfamily. | Unannotated protein; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the AlaDH/PNT family. | 0.944 |
cobB | pntB | GCA_000820065_03898 | GCA_000820065_01312 | Unannotated protein; Belongs to the sirtuin family. Class III subfamily. | Unannotated protein; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.933 |
cobB | rpoC | GCA_000820065_03898 | GCA_000820065_03161 | Unannotated protein; Belongs to the sirtuin family. Class III subfamily. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.632 |
ilvC | pntA | GCA_000820065_04495 | GCA_000820065_01311 | Unannotated protein; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | Unannotated protein; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the AlaDH/PNT family. | 0.626 |
mazG | cobB | GCA_000820065_01045 | GCA_000820065_03898 | Unannotated protein. | Unannotated protein; Belongs to the sirtuin family. Class III subfamily. | 0.933 |
mazG | nadD | GCA_000820065_01045 | GCA_000820065_02573 | Unannotated protein. | Unannotated protein; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.935 |
mazG | nadE | GCA_000820065_01045 | GCA_000820065_01799 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.933 |
mazG | nadK | GCA_000820065_01045 | GCA_000820065_02233 | Unannotated protein. | Unannotated protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.933 |
mazG | pntA | GCA_000820065_01045 | GCA_000820065_01311 | Unannotated protein. | Unannotated protein; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the AlaDH/PNT family. | 0.933 |
mazG | pntB | GCA_000820065_01045 | GCA_000820065_01312 | Unannotated protein. | Unannotated protein; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.934 |
nadD | cobB | GCA_000820065_02573 | GCA_000820065_03898 | Unannotated protein; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | Unannotated protein; Belongs to the sirtuin family. Class III subfamily. | 0.957 |
nadD | mazG | GCA_000820065_02573 | GCA_000820065_01045 | Unannotated protein; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | Unannotated protein. | 0.935 |
nadD | nadE | GCA_000820065_02573 | GCA_000820065_01799 | Unannotated protein; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | Unannotated protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.986 |
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