STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4SQ15_AERS4Unannotated protein. (107 aa)    
Predicted Functional Partners:
A4SQ14_AERS4
Unannotated protein.
 
     0.823
A4SQ13_AERS4
Unannotated protein.
 
     0.804
A4SQ16_AERS4
Unannotated protein.
  
  
 0.603
A4SQ11_AERS4
Unannotated protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
     
 0.596
A4SQ12_AERS4
Unannotated protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.587
A4SHD0_AERS4
Unannotated protein.
  
  
 0.549
birA
Unannotated protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.
     
 0.487
cobB
Unannotated protein; Belongs to the sirtuin family. Class III subfamily.
  
 
  0.440
zntA
Unannotated protein.
  
  
 0.409
A4SMC9_AERS4
Unannotated protein.
  
  
 0.409
Your Current Organism:
Aeromonas salmonicida
NCBI taxonomy Id: 29491
Other names: A. salmonicida subsp. salmonicida, Aeromonas salmonicida salmonicida, Aeromonas salmonicida subsp. salmonicida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.