STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4SJB0_AERS4Unannotated protein. (355 aa)    
Predicted Functional Partners:
A4SQ99_AERS4
Unannotated protein.
  
     0.617
ahe2
Unannotated protein; Belongs to the peptidase S8 family.
    
 0.501
GCA_000820065_00826
Unannotated protein.
   
 0.475
pepN
Unannotated protein.
   
 0.475
trmB
Unannotated protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.450
ftn
Unannotated protein; Iron-storage protein.
    
 0.444
GCA_000820065_02308
Unannotated protein.
       0.437
GCA_000820065_02309
Unannotated protein.
       0.437
ggt
Unannotated protein.
   
  0.404
metH
Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.403
Your Current Organism:
Aeromonas salmonicida
NCBI taxonomy Id: 29491
Other names: A. salmonicida subsp. salmonicida, Aeromonas salmonicida salmonicida, Aeromonas salmonicida subsp. salmonicida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.