Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A4SQ85_AERS4 | exeA | GCA_000820065_00808 | GCA_000820065_02973 | Unannotated protein. | Unannotated protein. | 0.613 |
A4SQ85_AERS4 | exeB | GCA_000820065_00808 | GCA_000820065_02972 | Unannotated protein. | Unannotated protein. | 0.567 |
FETP_AERS4 | cca | GCA_000820065_02970 | GCA_000820065_02974 | Unannotated protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | Unannotated protein; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases. | 0.677 |
FETP_AERS4 | exeA | GCA_000820065_02970 | GCA_000820065_02973 | Unannotated protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | Unannotated protein. | 0.526 |
FETP_AERS4 | exeB | GCA_000820065_02970 | GCA_000820065_02972 | Unannotated protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | Unannotated protein. | 0.526 |
FETP_AERS4 | mutY | GCA_000820065_02970 | GCA_000820065_02971 | Unannotated protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | Unannotated protein; Adenine glycosylase active on G-A mispairs. | 0.970 |
cca | FETP_AERS4 | GCA_000820065_02974 | GCA_000820065_02970 | Unannotated protein; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases. | Unannotated protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | 0.677 |
cca | exeA | GCA_000820065_02974 | GCA_000820065_02973 | Unannotated protein; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases. | Unannotated protein. | 0.480 |
cca | exeB | GCA_000820065_02974 | GCA_000820065_02972 | Unannotated protein; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases. | Unannotated protein. | 0.480 |
exeA | A4SQ85_AERS4 | GCA_000820065_02973 | GCA_000820065_00808 | Unannotated protein. | Unannotated protein. | 0.613 |
exeA | FETP_AERS4 | GCA_000820065_02973 | GCA_000820065_02970 | Unannotated protein. | Unannotated protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | 0.526 |
exeA | cca | GCA_000820065_02973 | GCA_000820065_02974 | Unannotated protein. | Unannotated protein; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases. | 0.480 |
exeA | exeB | GCA_000820065_02973 | GCA_000820065_02972 | Unannotated protein. | Unannotated protein. | 0.934 |
exeA | exeC | GCA_000820065_02973 | GCA_000820065_04232 | Unannotated protein. | Unannotated protein. | 0.654 |
exeA | exeD | GCA_000820065_02973 | GCA_000820065_04231 | Unannotated protein. | Unannotated protein. | 0.545 |
exeA | flgC | GCA_000820065_02973 | GCA_000820065_04024 | Unannotated protein. | Unannotated protein; Belongs to the flagella basal body rod proteins family. | 0.634 |
exeA | lfgC | GCA_000820065_02973 | GCA_000820065_03387 | Unannotated protein. | Unannotated protein; Belongs to the flagella basal body rod proteins family. | 0.634 |
exeA | mnmE | GCA_000820065_02973 | GCA_000820065_00560 | Unannotated protein. | Unannotated protein; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.489 |
exeA | mutY | GCA_000820065_02973 | GCA_000820065_02971 | Unannotated protein. | Unannotated protein; Adenine glycosylase active on G-A mispairs. | 0.526 |
exeB | A4SQ85_AERS4 | GCA_000820065_02972 | GCA_000820065_00808 | Unannotated protein. | Unannotated protein. | 0.567 |
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