STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4SR09_AERS4Unannotated protein. (156 aa)    
Predicted Functional Partners:
nadE
Unannotated protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.711
A4SK39_AERS4
Unannotated protein.
  
 
 0.669
argA
Unannotated protein; Belongs to the acetyltransferase family. ArgA subfamily.
    
  0.626
A4SR10_AERS4
Unannotated protein.
 
   
 0.575
A4SR11_AERS4
Unannotated protein.
       0.500
A4SS96_AERS4
Unannotated protein; Belongs to the CinA family.
    
 0.478
GCA_000820065_00176
Unannotated protein.
    
 0.471
A4SPK3_AERS4
Unannotated protein; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
    
 0.464
murB
Unannotated protein; Cell wall formation.
    
 0.443
metK
Unannotated protein; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
    
 0.432
Your Current Organism:
Aeromonas salmonicida
NCBI taxonomy Id: 29491
Other names: A. salmonicida subsp. salmonicida, Aeromonas salmonicida salmonicida, Aeromonas salmonicida subsp. salmonicida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.