STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000820065_03777Unannotated protein. (205 aa)    
Predicted Functional Partners:
GCA_000820065_03776
Unannotated protein.
     0.994
GCA_000820065_04153
Unannotated protein.
 
     0.914
A4SQ10_AERS4
Unannotated protein.
 
 0.890
A4SR40_AERS4
Unannotated protein.
 0.884
A4SMQ3_AERS4
Unannotated protein.
 0.876
A4SRC6_AERS4
Unannotated protein.
 0.874
A4SI79_AERS4
Unannotated protein.
 0.827
GCA_000820065_01423
Unannotated protein.
 0.823
GCA_000820065_03779
Unannotated protein.
     0.812
A4SR78_AERS4
Unannotated protein.
 
 
 0.805
Your Current Organism:
Aeromonas salmonicida
NCBI taxonomy Id: 29491
Other names: A. salmonicida subsp. salmonicida, Aeromonas salmonicida salmonicida, Aeromonas salmonicida subsp. salmonicida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.