STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rec2Unannotated protein. (704 aa)    
Predicted Functional Partners:
comF
Unannotated protein.
 
  
 0.953
smf
Unannotated protein.
 
  
 0.920
tapD
Unannotated protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. Processes the TapA pilin precursor during membrane translocation (By similarity).
 
  
 0.884
A4SSK3_AERS4
Unannotated protein.
  
    0.865
GCA_000820065_04409
Unannotated protein.
 
  
 0.806
spsF
Unannotated protein.
  
  
 0.779
exeF
Unannotated protein.
  
  
 0.779
GCA_000820065_04410
Unannotated protein.
  
  
 0.779
A4SLI4_AERS4
Unannotated protein.
  
  
 0.769
A4SJ96_AERS4
Unannotated protein.
 
  
 0.752
Your Current Organism:
Aeromonas salmonicida
NCBI taxonomy Id: 29491
Other names: A. salmonicida subsp. salmonicida, Aeromonas salmonicida salmonicida, Aeromonas salmonicida subsp. salmonicida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.