STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lafBUnannotated protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. (427 aa)    
Predicted Functional Partners:
lafC
Unannotated protein.
 
 
 0.980
lfgE
Unannotated protein.
 
  
 0.962
lfgK
Unannotated protein.
 
  
 0.962
GCA_000820065_03399
Unannotated protein.
 
 
 0.959
lfiF
Unannotated protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.958
lfgC
Unannotated protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.958
lfgL
Unannotated protein.
 
 
 0.958
flgE
Unannotated protein.
 
  
 0.955
lafS
Unannotated protein; Belongs to the sigma-70 factor family.
 
  
 0.953
flgC
Unannotated protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.952
Your Current Organism:
Aeromonas salmonicida
NCBI taxonomy Id: 29491
Other names: A. salmonicida subsp. salmonicida, Aeromonas salmonicida salmonicida, Aeromonas salmonicida subsp. salmonicida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.