STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000820065_04410Unannotated protein. (342 aa)    
Predicted Functional Partners:
GCA_000820065_04409
Unannotated protein.
     0.994
tapB
Unannotated protein.
 
 0.988
spsE
Unannotated protein.
 
 0.968
exeE
Unannotated protein; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 0.968
tapD
Unannotated protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. Processes the TapA pilin precursor during membrane translocation (By similarity).
 
  
 0.961
tapM
Unannotated protein.
 
 
 
 0.922
tapQ
Unannotated protein.
 
 
 
 0.899
tapT
Unannotated protein.
  
 0.834
tapO
Unannotated protein.
 
 
 
 0.831
tapN
Unannotated protein.
 
 
 
 0.819
Your Current Organism:
Aeromonas salmonicida
NCBI taxonomy Id: 29491
Other names: A. salmonicida subsp. salmonicida, Aeromonas salmonicida salmonicida, Aeromonas salmonicida subsp. salmonicida
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