STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
czcD-2Unannotated protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (303 aa)    
Predicted Functional Partners:
mdh
Unannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate.
  
    0.838
cysE
Unannotated protein.
     
 0.803
A4STA5_AERS4
Unannotated protein.
       0.714
cpxA
Unannotated protein.
 
     0.613
cpxR
Unannotated protein.
       0.549
A4SHD0_AERS4
Unannotated protein.
 
 
 0.515
trmL
Unannotated protein; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.
       0.473
lfgG
Unannotated protein; Belongs to the flagella basal body rod proteins family.
    
 
 0.472
flgG
Unannotated protein; Belongs to the flagella basal body rod proteins family.
    
 
 0.472
cmk
Unannotated protein.
  
    0.465
Your Current Organism:
Aeromonas salmonicida
NCBI taxonomy Id: 29491
Other names: A. salmonicida subsp. salmonicida, Aeromonas salmonicida salmonicida, Aeromonas salmonicida subsp. salmonicida
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.