Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EA26_05830Thiamine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)    
Predicted Functional Partners:
EA26_05800
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.827
EA26_05825
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.827
EA26_05820
YcfL protein: an outer membrane lipoprotein that is part of a salvage cluster; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.808
EA26_05815
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.800
kdkA
3-deoxy-D-manno-octulosonic acid kinase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family.
    
 0.765
EA26_15350
DNA transformation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.761
EA26_01390
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.756
EA26_08455
Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.
  
     0.756
EA26_01085
Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.755
EA26_04280
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.746
Your Current Organism:
Vibrio navarrensis
NCBI taxonomy Id: 29495
Other names: ATCC 51183, CAIM 609, CCUG 28805, CIP 103381, LMG 15976, LMG:15976, V. navarrensis
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