Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EA26_08030Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)    
Predicted Functional Partners:
EA26_07270
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.974
EA26_08995
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.946
EA26_12540
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.876
EA26_08035
Chemotaxis protein CheC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.875
EA26_12415
Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.829
EA26_06520
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.816
EA26_07275
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.816
EA26_06995
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.815
EA26_07010
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.803
EA26_11545
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.800
Your Current Organism:
Vibrio navarrensis
NCBI taxonomy Id: 29495
Other names: ATCC 51183, CAIM 609, CCUG 28805, CIP 103381, LMG 15976, LMG:15976, V. navarrensis
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