Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EA26_09080Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (671 aa)    
Predicted Functional Partners:
EA26_07270
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.982
EA26_12540
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.953
EA26_00220
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.950
EA26_06995
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.950
EA26_01160
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.947
EA26_03320
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.944
EA26_10470
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.930
EA26_18540
Histidine kinase; Part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.924
EA26_08885
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.916
EA26_11545
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.914
Your Current Organism:
Vibrio navarrensis
NCBI taxonomy Id: 29495
Other names: ATCC 51183, CAIM 609, CCUG 28805, CIP 103381, LMG 15976, LMG:15976, V. navarrensis
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