Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EA26_16005Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)    
Predicted Functional Partners:
EA26_16010
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.996
EA26_16000
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.920
EA26_15995
Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.912
EA26_01650
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.900
EA26_15990
Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.885
EA26_01645
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.869
EA26_13255
Peptide ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
  
 0.817
EA26_01655
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.765
EA26_18035
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.752
EA26_11135
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.736
Your Current Organism:
Vibrio navarrensis
NCBI taxonomy Id: 29495
Other names: ATCC 51183, CAIM 609, CCUG 28805, CIP 103381, LMG 15976, LMG:15976, V. navarrensis
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