Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BTO12_03230 | BTO12_08185 | GCA_001558055_03937 | GCA_001558055_00984 | Unannotated protein. | Unannotated protein. | 0.648 |
BTO12_03230 | BTO12_21415 | GCA_001558055_03937 | GCA_001558055_04720 | Unannotated protein. | Unannotated protein. | 0.977 |
BTO12_03230 | BTO12_22820 | GCA_001558055_03937 | GCA_001558055_01086 | Unannotated protein. | Unannotated protein. | 0.952 |
BTO12_03230 | BTO12_23380 | GCA_001558055_03937 | GCA_001558055_02279 | Unannotated protein. | Unannotated protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | 0.977 |
BTO12_03230 | msrB | GCA_001558055_03937 | GCA_001558055_00548 | Unannotated protein. | Unannotated protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.429 |
BTO12_08185 | BTO12_03230 | GCA_001558055_00984 | GCA_001558055_03937 | Unannotated protein. | Unannotated protein. | 0.648 |
BTO12_08185 | BTO12_21415 | GCA_001558055_00984 | GCA_001558055_04720 | Unannotated protein. | Unannotated protein. | 0.980 |
BTO12_08185 | BTO12_22820 | GCA_001558055_00984 | GCA_001558055_01086 | Unannotated protein. | Unannotated protein. | 0.972 |
BTO12_08185 | BTO12_23380 | GCA_001558055_00984 | GCA_001558055_02279 | Unannotated protein. | Unannotated protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | 0.980 |
BTO12_08185 | msrB | GCA_001558055_00984 | GCA_001558055_00548 | Unannotated protein. | Unannotated protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.860 |
BTO12_21415 | BTO12_03230 | GCA_001558055_04720 | GCA_001558055_03937 | Unannotated protein. | Unannotated protein. | 0.977 |
BTO12_21415 | BTO12_08185 | GCA_001558055_04720 | GCA_001558055_00984 | Unannotated protein. | Unannotated protein. | 0.980 |
BTO12_21415 | BTO12_22820 | GCA_001558055_04720 | GCA_001558055_01086 | Unannotated protein. | Unannotated protein. | 0.976 |
BTO12_21415 | msrB | GCA_001558055_04720 | GCA_001558055_00548 | Unannotated protein. | Unannotated protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.406 |
BTO12_22815 | BTO12_22820 | GCA_001558055_01087 | GCA_001558055_01086 | Unannotated protein. | Unannotated protein. | 0.989 |
BTO12_22815 | BTO12_22825 | GCA_001558055_01087 | GCA_001558055_01085 | Unannotated protein. | Unannotated protein; Possible subunit of a heme lyase. | 0.981 |
BTO12_22815 | BTO12_22830 | GCA_001558055_01087 | GCA_001558055_01084 | Unannotated protein. | Unannotated protein. | 0.989 |
BTO12_22815 | ccmC | GCA_001558055_01087 | GCA_001558055_01090 | Unannotated protein. | Unannotated protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. | 0.960 |
BTO12_22815 | ccmE | GCA_001558055_01087 | GCA_001558055_01088 | Unannotated protein. | Unannotated protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. | 0.979 |
BTO12_22820 | BTO12_03230 | GCA_001558055_01086 | GCA_001558055_03937 | Unannotated protein. | Unannotated protein. | 0.952 |
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