Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BTO12_00170 | BTO12_00175 | GCA_001558055_01880 | GCA_001558055_01879 | Unannotated protein. | Unannotated protein. | 0.449 |
BTO12_00170 | BTO12_00180 | GCA_001558055_01880 | GCA_001558055_01878 | Unannotated protein. | Unannotated protein. | 0.449 |
BTO12_00175 | BTO12_00170 | GCA_001558055_01879 | GCA_001558055_01880 | Unannotated protein. | Unannotated protein. | 0.449 |
BTO12_00175 | BTO12_00180 | GCA_001558055_01879 | GCA_001558055_01878 | Unannotated protein. | Unannotated protein. | 0.802 |
BTO12_00175 | BTO12_03440 | GCA_001558055_01879 | GCA_001558055_03980 | Unannotated protein. | Unannotated protein. | 0.448 |
BTO12_00175 | BTO12_09435 | GCA_001558055_01879 | GCA_001558055_04415 | Unannotated protein. | Unannotated protein. | 0.446 |
BTO12_00175 | BTO12_13640 | GCA_001558055_01879 | GCA_001558055_00187 | Unannotated protein. | Unannotated protein. | 0.600 |
BTO12_00175 | leuA | GCA_001558055_01879 | GCA_001558055_00868 | Unannotated protein. | Unannotated protein; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. | 0.408 |
BTO12_00175 | modB | GCA_001558055_01879 | GCA_001558055_00188 | Unannotated protein. | Unannotated protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.593 |
BTO12_00175 | nfuA | GCA_001558055_01879 | GCA_001558055_04440 | Unannotated protein. | Unannotated protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins. | 0.482 |
BTO12_00180 | BTO12_00170 | GCA_001558055_01878 | GCA_001558055_01880 | Unannotated protein. | Unannotated protein. | 0.449 |
BTO12_00180 | BTO12_00175 | GCA_001558055_01878 | GCA_001558055_01879 | Unannotated protein. | Unannotated protein. | 0.802 |
BTO12_03440 | BTO12_00175 | GCA_001558055_03980 | GCA_001558055_01879 | Unannotated protein. | Unannotated protein. | 0.448 |
BTO12_03440 | BTO12_09435 | GCA_001558055_03980 | GCA_001558055_04415 | Unannotated protein. | Unannotated protein. | 0.847 |
BTO12_03440 | leuA | GCA_001558055_03980 | GCA_001558055_00868 | Unannotated protein. | Unannotated protein; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. | 0.858 |
BTO12_03440 | nfuA | GCA_001558055_03980 | GCA_001558055_04440 | Unannotated protein. | Unannotated protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins. | 0.909 |
BTO12_09435 | BTO12_00175 | GCA_001558055_04415 | GCA_001558055_01879 | Unannotated protein. | Unannotated protein. | 0.446 |
BTO12_09435 | BTO12_03440 | GCA_001558055_04415 | GCA_001558055_03980 | Unannotated protein. | Unannotated protein. | 0.847 |
BTO12_09435 | nfuA | GCA_001558055_04415 | GCA_001558055_04440 | Unannotated protein. | Unannotated protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins. | 0.666 |
BTO12_13640 | BTO12_00175 | GCA_001558055_00187 | GCA_001558055_01879 | Unannotated protein. | Unannotated protein. | 0.600 |
page 1 of 2