Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
barA_1 | barA_2 | MAQ5080_00731 | MAQ5080_01177 | Signal transduction histidine-protein kinase BarA. | Signal transduction histidine-protein kinase BarA. | 0.999 |
barA_1 | barA_3 | MAQ5080_00731 | MAQ5080_01465 | Signal transduction histidine-protein kinase BarA. | Signal transduction histidine-protein kinase BarA. | 0.999 |
barA_1 | barA_4 | MAQ5080_00731 | MAQ5080_01950 | Signal transduction histidine-protein kinase BarA. | Signal transduction histidine-protein kinase BarA. | 0.999 |
barA_1 | barA_8 | MAQ5080_00731 | MAQ5080_03092 | Signal transduction histidine-protein kinase BarA. | Signal transduction histidine-protein kinase BarA. | 0.999 |
barA_1 | barA_9 | MAQ5080_00731 | MAQ5080_03110 | Signal transduction histidine-protein kinase BarA. | Signal transduction histidine-protein kinase BarA. | 0.999 |
barA_1 | kinE_2 | MAQ5080_00731 | MAQ5080_02950 | Signal transduction histidine-protein kinase BarA. | Sporulation kinase E. | 0.999 |
barA_1 | ompR_2 | MAQ5080_00731 | MAQ5080_03279 | Signal transduction histidine-protein kinase BarA. | Transcriptional regulatory protein OmpR. | 0.991 |
barA_1 | phoP_2 | MAQ5080_00731 | MAQ5080_00207 | Signal transduction histidine-protein kinase BarA. | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | 0.991 |
barA_1 | rstA | MAQ5080_00731 | MAQ5080_00093 | Signal transduction histidine-protein kinase BarA. | Transcriptional regulatory protein RstA. | 0.991 |
barA_1 | rstB | MAQ5080_00731 | MAQ5080_00092 | Signal transduction histidine-protein kinase BarA. | Sensor protein RstB. | 0.962 |
barA_2 | barA_1 | MAQ5080_01177 | MAQ5080_00731 | Signal transduction histidine-protein kinase BarA. | Signal transduction histidine-protein kinase BarA. | 0.999 |
barA_2 | barA_3 | MAQ5080_01177 | MAQ5080_01465 | Signal transduction histidine-protein kinase BarA. | Signal transduction histidine-protein kinase BarA. | 0.999 |
barA_2 | barA_4 | MAQ5080_01177 | MAQ5080_01950 | Signal transduction histidine-protein kinase BarA. | Signal transduction histidine-protein kinase BarA. | 0.999 |
barA_2 | barA_8 | MAQ5080_01177 | MAQ5080_03092 | Signal transduction histidine-protein kinase BarA. | Signal transduction histidine-protein kinase BarA. | 0.999 |
barA_2 | barA_9 | MAQ5080_01177 | MAQ5080_03110 | Signal transduction histidine-protein kinase BarA. | Signal transduction histidine-protein kinase BarA. | 0.999 |
barA_2 | kinE_2 | MAQ5080_01177 | MAQ5080_02950 | Signal transduction histidine-protein kinase BarA. | Sporulation kinase E. | 0.999 |
barA_2 | ompR_2 | MAQ5080_01177 | MAQ5080_03279 | Signal transduction histidine-protein kinase BarA. | Transcriptional regulatory protein OmpR. | 0.993 |
barA_2 | phoP_2 | MAQ5080_01177 | MAQ5080_00207 | Signal transduction histidine-protein kinase BarA. | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | 0.993 |
barA_2 | rstA | MAQ5080_01177 | MAQ5080_00093 | Signal transduction histidine-protein kinase BarA. | Transcriptional regulatory protein RstA. | 0.993 |
barA_2 | rstB | MAQ5080_01177 | MAQ5080_00092 | Signal transduction histidine-protein kinase BarA. | Sensor protein RstB. | 0.981 |
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