STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBS30394.1Hypothetical protein. (88 aa)    
Predicted Functional Partners:
SBS30391.1
Hypothetical protein.
 
     0.672
SBS36243.1
Hypothetical protein.
  
     0.576
SBS30957.1
DSBA-like thioredoxin domain protein.
  
     0.550
SBS27452.1
Hypothetical protein.
  
     0.513
SBS33506.1
Hypothetical protein.
  
     0.507
SBS31333.1
Tellurite resistance protein TerB.
  
    0.418
SBS28398.1
Hypothetical protein.
  
     0.402
Your Current Organism:
Marinomonas aquimarina
NCBI taxonomy Id: 295068
Other names: CCUG 49439, CECT 5080, CIP 108405, M. aquimarina, Marinomonas aquamarina, Marinomonas aquimarina corrig. Macian et al. 2005, strain 11SM4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.