STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBS31177.1Hypothetical protein. (159 aa)    
Predicted Functional Partners:
sir
Sulfite reductase [ferredoxin].
 
 
 0.995
cysN
Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
 
 0.720
cysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite.
 
  
 0.651
cysC
Putative adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
  
 
  0.607
nfuA
Fe/S biogenesis protein NfuA; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.
       0.598
cysD
Sulfate adenylyltransferase subunit 2.
  
  
 0.544
cysJ
Sulfite reductase [NADPH] flavoprotein alpha-component.
     
 0.525
sseA
3-mercaptopyruvate sulfurtransferase.
    
 0.515
SBS27389.1
Hypothetical protein.
  
     0.448
cysG
Siroheme synthase; Belongs to the precorrin methyltransferase family.
 
    0.431
Your Current Organism:
Marinomonas aquimarina
NCBI taxonomy Id: 295068
Other names: CCUG 49439, CECT 5080, CIP 108405, M. aquimarina, Marinomonas aquamarina, Marinomonas aquimarina corrig. Macian et al. 2005, strain 11SM4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.