STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBS31538.1Hypothetical protein. (375 aa)    
Predicted Functional Partners:
mlaA
Putative phospholipid-binding lipoprotein MlaA precursor.
   
 
 0.841
tolB
Protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
   
 
 0.741
btuB
Vitamin B12 transporter BtuB precursor.
    
 
 0.662
degP
Periplasmic serine endoprotease DegP precursor.
    
 
 0.622
mucD
Putative periplasmic serine endoprotease DegP-like precursor; Belongs to the peptidase S1C family.
    
 
 0.622
mcp3_1
Methyl-accepting chemotaxis protein 3.
  
    0.515
ompA
Outer membrane protein A precursor.
  
 
 0.514
SBS24680.1
Hypothetical protein.
  
 
 0.428
Your Current Organism:
Marinomonas aquimarina
NCBI taxonomy Id: 295068
Other names: CCUG 49439, CECT 5080, CIP 108405, M. aquimarina, Marinomonas aquamarina, Marinomonas aquimarina corrig. Macian et al. 2005, strain 11SM4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.