STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBS31653.1Hypothetical protein. (101 aa)    
Predicted Functional Partners:
ompR_1
Transcriptional regulatory protein OmpR.
 
 0.996
phoP_1
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP.
 
 
  0.957
SBS28688.1
STAS domain protein.
  
  
  0.955
barA_4
Signal transduction histidine-protein kinase BarA.
  
 
 0.948
SBS24939.1
Hypothetical protein.
  
  
 
0.944
barA_1
Signal transduction histidine-protein kinase BarA.
  
 
 0.936
barA_2
Signal transduction histidine-protein kinase BarA.
  
 
 0.936
barA_3
Signal transduction histidine-protein kinase BarA.
  
 
 0.936
barA_6
Signal transduction histidine-protein kinase BarA.
  
 
 0.936
barA_8
Signal transduction histidine-protein kinase BarA.
  
 
 0.936
Your Current Organism:
Marinomonas aquimarina
NCBI taxonomy Id: 295068
Other names: CCUG 49439, CECT 5080, CIP 108405, M. aquimarina, Marinomonas aquamarina, Marinomonas aquimarina corrig. Macian et al. 2005, strain 11SM4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.