Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SBS29834.1 | exbB_1 | MAQ5080_01517 | MAQ5080_01514 | Transport protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Biopolymer transport protein ExbB. | 0.981 |
SBS29834.1 | exbB_2 | MAQ5080_01517 | MAQ5080_02083 | Transport protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Biopolymer transport protein ExbB. | 0.879 |
SBS29834.1 | exbB_3 | MAQ5080_01517 | MAQ5080_02103 | Transport protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Biopolymer transport protein ExbB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.941 |
SBS29834.1 | exbD_3 | MAQ5080_01517 | MAQ5080_02082 | Transport protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Biopolymer transport protein ExbD. | 0.945 |
SBS31824.1 | exbB_2 | MAQ5080_02080 | MAQ5080_02083 | Hypothetical protein; Belongs to the UPF0434 family. | Biopolymer transport protein ExbB. | 0.774 |
SBS31824.1 | exbD_3 | MAQ5080_02080 | MAQ5080_02082 | Hypothetical protein; Belongs to the UPF0434 family. | Biopolymer transport protein ExbD. | 0.837 |
SBS31824.1 | lpxK | MAQ5080_02080 | MAQ5080_02081 | Hypothetical protein; Belongs to the UPF0434 family. | Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.859 |
SBS31824.1 | murB | MAQ5080_02080 | MAQ5080_02078 | Hypothetical protein; Belongs to the UPF0434 family. | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | 0.835 |
SBS31824.1 | yfkJ | MAQ5080_02080 | MAQ5080_02079 | Hypothetical protein; Belongs to the UPF0434 family. | Low molecular weight protein-tyrosine-phosphatase YfkJ. | 0.835 |
SBS31893.1 | exbB_1 | MAQ5080_02101 | MAQ5080_01514 | Hypothetical protein. | Biopolymer transport protein ExbB. | 0.879 |
SBS31893.1 | exbB_2 | MAQ5080_02101 | MAQ5080_02083 | Hypothetical protein. | Biopolymer transport protein ExbB. | 0.879 |
SBS31893.1 | exbB_3 | MAQ5080_02101 | MAQ5080_02103 | Hypothetical protein. | Biopolymer transport protein ExbB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.989 |
SBS31893.1 | exbD_3 | MAQ5080_02101 | MAQ5080_02082 | Hypothetical protein. | Biopolymer transport protein ExbD. | 0.938 |
SBS35766.1 | exbB_1 | MAQ5080_03260 | MAQ5080_01514 | Gram-negative bacterial tonB protein. | Biopolymer transport protein ExbB. | 0.897 |
SBS35766.1 | exbB_2 | MAQ5080_03260 | MAQ5080_02083 | Gram-negative bacterial tonB protein. | Biopolymer transport protein ExbB. | 0.962 |
SBS35766.1 | exbB_3 | MAQ5080_03260 | MAQ5080_02103 | Gram-negative bacterial tonB protein. | Biopolymer transport protein ExbB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.888 |
SBS35766.1 | exbD_3 | MAQ5080_03260 | MAQ5080_02082 | Gram-negative bacterial tonB protein. | Biopolymer transport protein ExbD. | 0.954 |
exbB_1 | SBS29834.1 | MAQ5080_01514 | MAQ5080_01517 | Biopolymer transport protein ExbB. | Transport protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.981 |
exbB_1 | SBS31893.1 | MAQ5080_01514 | MAQ5080_02101 | Biopolymer transport protein ExbB. | Hypothetical protein. | 0.879 |
exbB_1 | SBS35766.1 | MAQ5080_01514 | MAQ5080_03260 | Biopolymer transport protein ExbB. | Gram-negative bacterial tonB protein. | 0.897 |
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