Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SBS31325.1 | fccB | MAQ5080_01926 | MAQ5080_03241 | Hypothetical protein. | Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain precursor. | 0.407 |
SBS31325.1 | tusA_1 | MAQ5080_01926 | MAQ5080_02093 | Hypothetical protein. | Sulfurtransferase TusA; Belongs to the sulfur carrier protein TusA family. | 0.557 |
SBS31325.1 | tusA_2 | MAQ5080_01926 | MAQ5080_02136 | Hypothetical protein. | Sulfurtransferase TusA; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family. | 0.557 |
SBS32011.1 | tusA_2 | MAQ5080_02137 | MAQ5080_02136 | Alpha/beta hydrolase family protein. | Sulfurtransferase TusA; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family. | 0.750 |
blh_2 | fccB | MAQ5080_03240 | MAQ5080_03241 | Beta-lactamase hydrolase-like protein. | Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain precursor. | 0.994 |
blh_2 | fre | MAQ5080_03240 | MAQ5080_00346 | Beta-lactamase hydrolase-like protein. | NAD(P)H-flavin reductase. | 0.917 |
blh_2 | gcvT_2 | MAQ5080_03240 | MAQ5080_02703 | Beta-lactamase hydrolase-like protein. | Aminomethyltransferase; Belongs to the GcvT family. | 0.732 |
blh_2 | tusA_1 | MAQ5080_03240 | MAQ5080_02093 | Beta-lactamase hydrolase-like protein. | Sulfurtransferase TusA; Belongs to the sulfur carrier protein TusA family. | 0.738 |
blh_2 | tusA_2 | MAQ5080_03240 | MAQ5080_02136 | Beta-lactamase hydrolase-like protein. | Sulfurtransferase TusA; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family. | 0.738 |
fccB | SBS31325.1 | MAQ5080_03241 | MAQ5080_01926 | Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain precursor. | Hypothetical protein. | 0.407 |
fccB | blh_2 | MAQ5080_03241 | MAQ5080_03240 | Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain precursor. | Beta-lactamase hydrolase-like protein. | 0.994 |
fccB | fre | MAQ5080_03241 | MAQ5080_00346 | Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain precursor. | NAD(P)H-flavin reductase. | 0.917 |
fccB | gcvT_2 | MAQ5080_03241 | MAQ5080_02703 | Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain precursor. | Aminomethyltransferase; Belongs to the GcvT family. | 0.732 |
fccB | tusA_1 | MAQ5080_03241 | MAQ5080_02093 | Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain precursor. | Sulfurtransferase TusA; Belongs to the sulfur carrier protein TusA family. | 0.738 |
fccB | tusA_2 | MAQ5080_03241 | MAQ5080_02136 | Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain precursor. | Sulfurtransferase TusA; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family. | 0.738 |
fre | blh_2 | MAQ5080_00346 | MAQ5080_03240 | NAD(P)H-flavin reductase. | Beta-lactamase hydrolase-like protein. | 0.917 |
fre | fccB | MAQ5080_00346 | MAQ5080_03241 | NAD(P)H-flavin reductase. | Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain precursor. | 0.917 |
fre | gcvT_2 | MAQ5080_00346 | MAQ5080_02703 | NAD(P)H-flavin reductase. | Aminomethyltransferase; Belongs to the GcvT family. | 0.985 |
fre | iscS | MAQ5080_00346 | MAQ5080_01229 | NAD(P)H-flavin reductase. | Cysteine desulfurase. | 0.889 |
fre | spo0F | MAQ5080_00346 | MAQ5080_02390 | NAD(P)H-flavin reductase. | Sporulation initiation phosphotransferase F. | 0.424 |
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