STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBS36061.1Hypothetical protein. (53 aa)    
Predicted Functional Partners:
SBS31148.1
Type I restriction enzyme EcoKI subunit R.
  
    0.781
SBS32261.1
Hypothetical protein.
  
    0.781
SBS35861.1
Hypothetical protein.
  
    0.781
SBS36057.1
Hypothetical protein.
       0.697
lepB
Signal peptidase I; Belongs to the peptidase S26 family.
  
 
  0.530
SBS36055.1
Hypothetical protein.
  
  
 0.518
SBS36064.1
Hypothetical protein.
       0.485
SBS27977.1
Peptidase S26.
   
 
  0.466
uvrB_2
UvrABC system protein B.
  
    0.440
Your Current Organism:
Marinomonas aquimarina
NCBI taxonomy Id: 295068
Other names: CCUG 49439, CECT 5080, CIP 108405, M. aquimarina, Marinomonas aquamarina, Marinomonas aquimarina corrig. Macian et al. 2005, strain 11SM4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.