STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBS36243.1Hypothetical protein. (91 aa)    
Predicted Functional Partners:
SBS27452.1
Hypothetical protein.
  
     0.638
SBS30520.1
Hypothetical protein.
  
     0.638
SBS32239.1
Mechanosensitive ion channel.
  
     0.593
SBS36241.1
Ion transport protein.
 
     0.593
SBS30394.1
Hypothetical protein.
  
     0.576
SBS36246.1
Mechanosensitive channel MscS.
       0.548
SBS36248.1
Membrane transport protein.
       0.531
SBS29639.1
Hypothetical protein; NfeD-like C-terminal, partner-binding.
  
     0.482
SBS33461.1
Outer membrane efflux protein.
  
     0.481
SBS30391.1
Hypothetical protein.
  
     0.461
Your Current Organism:
Marinomonas aquimarina
NCBI taxonomy Id: 295068
Other names: CCUG 49439, CECT 5080, CIP 108405, M. aquimarina, Marinomonas aquamarina, Marinomonas aquimarina corrig. Macian et al. 2005, strain 11SM4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.