STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM91753.1SusD family protein. (464 aa)    
Predicted Functional Partners:
SEM91778.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.944
SEM91739.1
Prolyl oligopeptidase family protein.
 
     0.824
SEM45261.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.774
SEM96214.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.774
SEM91692.1
Hypothetical protein.
  
     0.745
SEM45195.1
Methylamine utilisation protein MauE.
  
     0.742
SEM96297.1
Hypothetical protein.
  
     0.740
SEM91631.1
RteC protein.
  
     0.695
SEM96380.1
RteC protein.
  
     0.694
SEM27711.1
Hypothetical protein.
  
     0.678
Your Current Organism:
Chryseobacterium taichungense
NCBI taxonomy Id: 295069
Other names: C. taichungense, CCUG 50001, CIP 108519, Chryseobacterium taichungense Shen et al. 2005, DSM 17453, strain CC-TWGS1-8
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.